IL_8FRU_022
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- CC*GCG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FRU_022 not in the Motif Atlas
- Homologous match to IL_8C3A_038
- Geometric discrepancy: 0.1475
- The information below is about IL_8C3A_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05035.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 38
Unit IDs
8FRU|1|1|C|684
8FRU|1|1|C|685
*
8FRU|1|1|G|819
8FRU|1|1|C|820
8FRU|1|1|G|821
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain L
- 60S ribosomal protein eL13
- Chain Q
- 60S ribosomal protein eL18
- Chain T
- 60S ribosomal protein eL21
- Chain a
- 60S ribosomal protein uL15
- Chain b
- 60S ribosomal protein eL29
Coloring options: