IL_8FRU_034
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- CCCGCGGAAC*GGAAAAUGGAGCGCGCCGGAG
- Length
- 31 nucleotides
- Bulged bases
- 8FRU|1|1|C|896, 8FRU|1|1|A|1000, 8FRU|1|1|G|1014
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FRU|1|1|C|894
8FRU|1|1|C|895
8FRU|1|1|C|896
8FRU|1|1|G|897
8FRU|1|1|C|898
8FRU|1|1|G|899
8FRU|1|1|G|900
8FRU|1|1|A|901
8FRU|1|1|A|902
8FRU|1|1|C|903
*
8FRU|1|1|G|997
8FRU|1|1|G|998
8FRU|1|1|A|999
8FRU|1|1|A|1000
8FRU|1|1|A|1001
8FRU|1|1|A|1002
8FRU|1|1|U|1003
8FRU|1|1|G|1004
8FRU|1|1|G|1005
8FRU|1|1|A|1006
8FRU|1|1|G|1007
8FRU|1|1|C|1008
8FRU|1|1|G|1009
8FRU|1|1|C|1010
8FRU|1|1|G|1011
8FRU|1|1|C|1012
8FRU|1|1|C|1013
8FRU|1|1|G|1014
8FRU|1|1|G|1015
8FRU|1|1|A|1016
8FRU|1|1|G|1017
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain B
- 60S ribosomal protein uL3
- Chain H
- 60S ribosomal protein uL6
- Chain I
- 60S ribosomal protein uL16
- Chain M
- 60S ribosomal protein eL14
- Chain O
- 60S ribosomal protein uL13
- Chain S
- 60S ribosomal protein eL20
- Chain f
- 60S ribosomal protein eL33
- Chain m
- 60S ribosomal protein eL40
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