IL_8FRU_101
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- AGAG*CGAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FRU_101 not in the Motif Atlas
- Geometric match to IL_4V9F_100
- Geometric discrepancy: 0.076
- The information below is about IL_4V9F_100
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
8FRU|1|1|A|2648
8FRU|1|1|G|2649
8FRU|1|1|A|2650
8FRU|1|1|G|2651
*
8FRU|1|1|C|2657
8FRU|1|1|G|2658
8FRU|1|1|A|2659
8FRU|1|1|U|2660
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain R
- 60S ribosomal protein eL19
- Chain U
- 60S ribosomal protein eL22
Coloring options: