IL_8FRU_114

3D structure

PDB id

8FRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

60S subunit of the Giardia lamblia 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CGGAC*GGAGAGG

Length

12 nucleotides

Bulged bases

8FRU|1|1|A|1392

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FRU|1|1|C|1376
8FRU|1|1|G|1377
8FRU|1|1|G|1378
8FRU|1|1|A|1379
8FRU|1|1|C|1380
*
8FRU|1|1|G|1390
8FRU|1|1|G|1391
8FRU|1|1|A|1392
8FRU|1|1|G|1393
8FRU|1|1|A|1394
8FRU|1|1|G|1395
8FRU|1|1|G|1396

Current chains

Chain 1

28S rRNA

Nearby chains

Chain R

60S ribosomal protein eL19

Chain Z

60S ribosomal protein eL27

Chain c

60S ribosomal protein eL30

Chain p

60S ribosomal protein eL43