IL_8FTO_098

3D structure

PDB id

8FTO (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with an improved MS2 tag inserted in H98

Experimental method

ELECTRON MICROSCOPY

Resolution

1.85 Å

Loop

Sequence

GGGU*ACUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FTO_098 not in the Motif Atlas

Geometric match to IL_4EYA_008

Geometric discrepancy: 0.309

The information below is about IL_4EYA_008

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

8FTO|1|a|G|881
8FTO|1|a|G|882
8FTO|1|a|G|883
8FTO|1|a|U|884
*
8FTO|1|a|A|892
8FTO|1|a|C|893
8FTO|1|a|U|894
8FTO|1|a|U|895

Current chains

Chain a

23S rRNA

Nearby chains