IL_8FTO_119

3D structure

PDB id

8FTO (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with an improved MS2 tag inserted in H98

Experimental method

ELECTRON MICROSCOPY

Resolution

1.85 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

8FTO|1|a|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FTO_119 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.0503

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

8FTO|1|a|C|1437
8FTO|1|a|U|1438
8FTO|1|a|A|1439
8FTO|1|a|U|1440
*
8FTO|1|a|A|1551
8FTO|1|a|A|1552
8FTO|1|a|A|1553
8FTO|1|a|U|1554
8FTO|1|a|G|1555

Current chains

Chain a

23S rRNA

Nearby chains