IL_8FTO_165
3D structure
- PDB id
- 8FTO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with an improved MS2 tag inserted in H98
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.85 Å
Loop
- Sequence
- UCACU*AAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FTO_165 not in the Motif Atlas
- Homologous match to IL_7RQB_104
- Geometric discrepancy: 0.0891
- The information below is about IL_7RQB_104
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.6
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
8FTO|1|a|U|2680
8FTO|1|a|C|2681
8FTO|1|a|A|2682
8FTO|1|a|C|2683
8FTO|1|a|U|2684
*
8FTO|1|a|A|2725
8FTO|1|a|A|2726
8FTO|1|a|A|2727
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain j
- 50S ribosomal protein L14
- Chain m
- 50S ribosomal protein L17
- Chain o
- 50S ribosomal protein L19
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