IL_8FZD_170
3D structure
- PDB id
- 8FZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with apoRF3, RF1, P- and E-site tRNAPhe (Composite state I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UACAAAG*CAUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 8FZD|1|a|U|1286
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZD_170 not in the Motif Atlas
- Homologous match to IL_5J7L_054
- Geometric discrepancy: 0.1297
- The information below is about IL_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.2
- Basepair signature
- cWW-L-R-tWH-L-R-L-tWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8FZD|1|a|U|1247
8FZD|1|a|A|1248
8FZD|1|a|C|1249
8FZD|1|a|A|1250
8FZD|1|a|A|1251
8FZD|1|a|A|1252
8FZD|1|a|G|1253
*
8FZD|1|a|C|1284
8FZD|1|a|A|1285
8FZD|1|a|U|1286
8FZD|1|a|A|1287
8FZD|1|a|A|1288
8FZD|1|a|A|1289
8FZD|1|a|G|1290
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
Coloring options: