IL_8FZF_058
3D structure
- PDB id
- 8FZF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUAG*UGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZF_058 not in the Motif Atlas
- Homologous match to IL_5J7L_300
- Geometric discrepancy: 0.1092
- The information below is about IL_5J7L_300
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_38862.4
- Basepair signature
- cWW-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
8FZF|1|A|U|1474
8FZF|1|A|G|1475
8FZF|1|A|U|1476
8FZF|1|A|A|1477
8FZF|1|A|G|1478
*
8FZF|1|A|U|1513
8FZF|1|A|G|1514
8FZF|1|A|A|1515
8FZF|1|A|G|1516
8FZF|1|A|G|1517
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: