IL_8FZF_157
3D structure
- PDB id
- 8FZF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAGAG*UGGA
- Length
- 9 nucleotides
- Bulged bases
- 8FZF|1|a|A|665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZF_157 not in the Motif Atlas
- Homologous match to IL_5J7L_033
- Geometric discrepancy: 0.1036
- The information below is about IL_5J7L_033
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
8FZF|1|a|U|662
8FZF|1|a|A|663
8FZF|1|a|G|664
8FZF|1|a|A|665
8FZF|1|a|G|666
*
8FZF|1|a|U|740
8FZF|1|a|G|741
8FZF|1|a|G|742
8FZF|1|a|A|743
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain f
- 30S ribosomal protein S6
- Chain o
- Small ribosomal subunit protein uS15
- Chain r
- 30S ribosomal protein S18
Coloring options: