IL_8FZF_159
3D structure
- PDB id
- 8FZF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGUAG*CGUAGAGAU
- Length
- 15 nucleotides
- Bulged bases
- 8FZF|1|a|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZF_159 not in the Motif Atlas
- Homologous match to IL_4LFB_031
- Geometric discrepancy: 0.171
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
8FZF|1|a|G|683
8FZF|1|a|U|684
8FZF|1|a|G|685
8FZF|1|a|U|686
8FZF|1|a|A|687
8FZF|1|a|G|688
*
8FZF|1|a|C|699
8FZF|1|a|G|700
8FZF|1|a|U|701
8FZF|1|a|A|702
8FZF|1|a|G|703
8FZF|1|a|A|704
8FZF|1|a|G|705
8FZF|1|a|A|706
8FZF|1|a|U|707
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain C
- 50S ribosomal protein L2
- Chain k
- 30S ribosomal protein S11
Coloring options: