IL_8FZG_085
3D structure
- PDB id
- 8FZG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (Composite state II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGUAGGAUAG*CC
- Length
- 13 nucleotides
- Bulged bases
- 8FZG|1|A|U|2111, 8FZG|1|A|G|2112, 8FZG|1|A|U|2118
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZG_085 not in the Motif Atlas
- Homologous match to IL_3U4M_002
- Geometric discrepancy: 0.4619
- The information below is about IL_3U4M_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32056.1
- Basepair signature
- cWW-L-cWW-L-L-tWH-R-L-R-L
- Number of instances in this motif group
- 3
Unit IDs
8FZG|1|A|G|2110
8FZG|1|A|U|2111
8FZG|1|A|G|2112
8FZG|1|A|U|2113
8FZG|1|A|A|2114
8FZG|1|A|G|2115
8FZG|1|A|G|2116
8FZG|1|A|A|2117
8FZG|1|A|U|2118
8FZG|1|A|A|2119
8FZG|1|A|G|2120
*
8FZG|1|A|C|2178
8FZG|1|A|C|2179
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain y
- Transfer RNA; tRNA
Coloring options: