IL_8FZH_184
3D structure
- PDB id
- 8FZH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUAAUUGAUG*UUGAUCGAAG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZH_184 not in the Motif Atlas
- Homologous match to IL_5J7L_387
- Geometric discrepancy: 0.0909
- The information below is about IL_5J7L_387
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61249.1
- Basepair signature
- cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
8FZH|1|A|U|1851
8FZH|1|A|U|1852
8FZH|1|A|A|1853
8FZH|1|A|A|1854
8FZH|1|A|U|1855
8FZH|1|A|U|1856
8FZH|1|A|G|1857
8FZH|1|A|A|1858
8FZH|1|A|U|1859
8FZH|1|A|G|1860
*
8FZH|1|A|U|1882
8FZH|1|A|U|1883
8FZH|1|A|G|1884
8FZH|1|A|A|1885
8FZH|1|A|U|1886
8FZH|1|A|C|1887
8FZH|1|A|G|1888
8FZH|1|A|A|1889
8FZH|1|A|A|1890
8FZH|1|A|G|1891
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain y
- Transfer RNA; tRNA
Coloring options: