IL_8FZI_107
3D structure
- PDB id
- 8FZI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZI_107 not in the Motif Atlas
- Homologous match to IL_7A0S_094
- Geometric discrepancy: 0.1102
- The information below is about IL_7A0S_094
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.5
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
8FZI|1|A|C|2652
8FZI|1|A|U|2653
8FZI|1|A|A|2654
8FZI|1|A|G|2655
8FZI|1|A|U|2656
8FZI|1|A|A|2657
8FZI|1|A|C|2658
*
8FZI|1|A|G|2663
8FZI|1|A|G|2664
8FZI|1|A|A|2665
8FZI|1|A|C|2666
8FZI|1|A|C|2667
8FZI|1|A|G|2668
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L6
- Chain v
- Peptide chain release factor RF3
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