IL_8G2U_153

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

8G2U|1|v|G|926

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G2U_153 not in the Motif Atlas

Geometric match to IL_7A0S_017

Geometric discrepancy: 0.3769

The information below is about IL_7A0S_017

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

60

Unit IDs

8G2U|1|v|G|925
8G2U|1|v|G|926
8G2U|1|v|G|927
*
8G2U|1|v|U|1390
8G2U|1|v|U|1391

Current chains

Chain v

16S rRNA

Nearby chains

Chain f

30S ribosomal protein S7