IL_8G2U_158
3D structure
- PDB id
- 8G2U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAGUU*AAUGUGCCUUCGGGAAC
- Length
- 23 nucleotides
- Bulged bases
- 8G2U|1|v|U|1030, 8G2U|1|v|C|1031
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G2U_158 not in the Motif Atlas
- Homologous match to IL_5J7L_045
- Geometric discrepancy: 0.5394
- The information below is about IL_5J7L_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_13394.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R
- Number of instances in this motif group
- 1
Unit IDs
8G2U|1|v|G|1003
8G2U|1|v|A|1004
8G2U|1|v|A|1005
8G2U|1|v|G|1006
8G2U|1|v|U|1007
8G2U|1|v|U|1008
*
8G2U|1|v|A|1021
8G2U|1|v|A|1022
8G2U|1|v|U|1023
8G2U|1|v|G|1024
8G2U|1|v|U|1025
8G2U|1|v|G|1026
8G2U|1|v|C|1027
8G2U|1|v|C|1028
8G2U|1|v|U|1029
8G2U|1|v|U|1030
8G2U|1|v|C|1031
8G2U|1|v|G|1032
8G2U|1|v|G|1033
8G2U|1|v|G|1034
8G2U|1|v|A|1035
8G2U|1|v|A|1036
8G2U|1|v|C|1037
Current chains
- Chain v
- 16S rRNA
Nearby chains
- Chain m
- 30S ribosomal protein S14
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