IL_8G2U_189
3D structure
- PDB id
- 8G2U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AGAAU*GGAAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G2U_189 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.1022
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
8G2U|1|v|A|673
8G2U|1|v|G|674
8G2U|1|v|A|675
8G2U|1|v|A|676
8G2U|1|v|U|677
*
8G2U|1|v|G|713
8G2U|1|v|G|714
8G2U|1|v|A|715
8G2U|1|v|A|716
8G2U|1|v|U|717
Current chains
- Chain v
- 16S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain e
- 30S ribosomal protein S6, non-modified isoform
- Chain j
- 30S ribosomal protein S11
- Chain q
- 30S ribosomal protein S18
- Chain t
- 30S ribosomal protein S21 (Fragment)
Coloring options: