IL_8G31_001
3D structure
- PDB id
- 8G31 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CG*UAG
- Length
- 5 nucleotides
- Bulged bases
- 8G31|1|A|A|66
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G31_001 not in the Motif Atlas
- Homologous match to IL_5J7L_355
- Geometric discrepancy: 0.2523
- The information below is about IL_5J7L_355
- Detailed Annotation
- Major groove intercalation
- Broad Annotation
- Major groove intercalation
- Motif group
- IL_31462.5
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 129
Unit IDs
8G31|1|A|C|17
8G31|1|A|G|18
*
8G31|1|A|U|65
8G31|1|A|A|66
8G31|1|A|G|67
Current chains
- Chain A
- 5S
Nearby chains
- Chain B
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: