IL_8G31_074
3D structure
- PDB id
- 8G31 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGCAAAC*GGACGUAUA
- Length
- 16 nucleotides
- Bulged bases
- 8G31|1|B|A|1801, 8G31|1|B|C|1816, 8G31|1|B|U|1820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G31_074 not in the Motif Atlas
- Homologous match to IL_7RQB_070
- Geometric discrepancy: 0.1039
- The information below is about IL_7RQB_070
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_17069.3
- Basepair signature
- cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW
- Number of instances in this motif group
- 5
Unit IDs
8G31|1|B|U|1798
8G31|1|B|G|1799
8G31|1|B|C|1800
8G31|1|B|A|1801
8G31|1|B|A|1802
8G31|1|B|A|1803
8G31|1|B|C|1804
*
8G31|1|B|G|1813
8G31|1|B|G|1814
8G31|1|B|A|1815
8G31|1|B|C|1816
8G31|1|B|G|1817
8G31|1|B|U|1818
8G31|1|B|A|1819
8G31|1|B|U|1820
8G31|1|B|A|1821
Current chains
- Chain B
- 23S
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain v
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: