IL_8G31_078

3D structure

PDB id

8G31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G31_078 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.1338

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN variation

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

8G31|1|B|U|1864
8G31|1|B|U|1865
8G31|1|B|A|1866
8G31|1|B|G|1867
*
8G31|1|B|C|1874
8G31|1|B|G|1875
8G31|1|B|A|1876
8G31|1|B|A|1877
8G31|1|B|G|1878

Current chains

Chain B

23S

Nearby chains