IL_8G31_081

3D structure

PDB id

8G31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACG*CUAU

Length

7 nucleotides

Bulged bases

8G31|1|B|C|2055, 8G31|1|B|U|2613, 8G31|1|B|A|2614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G31_081 not in the Motif Atlas

Homologous match to IL_5J7L_321

Geometric discrepancy: 0.1256

The information below is about IL_5J7L_321

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83389.2

Basepair signature

cWW-cWW

Number of instances in this motif group

5

Unit IDs

8G31|1|B|A|2054
8G31|1|B|C|2055
8G31|1|B|G|2056
*
8G31|1|B|C|2612
8G31|1|B|U|2613
8G31|1|B|A|2614
8G31|1|B|U|2615

Current chains

Chain B

23S

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain S

50S ribosomal protein L22