3D structure

PDB id
8G31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CUGAAG*CGUG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8G31_109 not in the Motif Atlas
Homologous match to IL_5J7L_351
Geometric discrepancy: 0.1721
The information below is about IL_5J7L_351
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_29471.1
Basepair signature
cWW-cWW-L-tHS-L-cWW
Number of instances in this motif group
1

Unit IDs

8G31|1|B|C|2806
8G31|1|B|U|2807
8G31|1|B|G|2808
8G31|1|B|A|2809
8G31|1|B|A|2810
8G31|1|B|G|2811
*
8G31|1|B|C|2889
8G31|1|B|G|2890
8G31|1|B|U|2891
8G31|1|B|G|2892

Current chains

Chain B
23S

Nearby chains

Chain 0
50S ribosomal protein L32
Chain D
50S ribosomal protein L3
Chain S
50S ribosomal protein L22

Coloring options:


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