IL_8G31_138
3D structure
- PDB id
- 8G31 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGGCUAAC*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G31_138 not in the Motif Atlas
- Homologous match to IL_5J7L_024
- Geometric discrepancy: 0.0985
- The information below is about IL_5J7L_024
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_41203.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 11
Unit IDs
8G31|1|v|C|504
8G31|1|v|G|505
8G31|1|v|G|506
8G31|1|v|C|507
8G31|1|v|U|508
8G31|1|v|A|509
8G31|1|v|A|510
8G31|1|v|C|511
*
8G31|1|v|G|540
8G31|1|v|G|541
Current chains
- Chain v
- 16S
Nearby chains
- Chain c
- 30S ribosomal protein S4
- Chain k
- 30S ribosomal protein S12
Coloring options: