IL_8G31_151
3D structure
- PDB id
- 8G31 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G31_151 not in the Motif Atlas
- Homologous match to IL_4LFB_033
- Geometric discrepancy: 0.0697
- The information below is about IL_4LFB_033
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
8G31|1|v|C|779
8G31|1|v|A|780
8G31|1|v|A|781
8G31|1|v|A|782
8G31|1|v|C|783
*
8G31|1|v|G|799
8G31|1|v|G|800
8G31|1|v|U|801
8G31|1|v|A|802
8G31|1|v|G|803
Current chains
- Chain v
- 16S
Nearby chains
- Chain B
- Large subunit ribosomal RNA; LSU rRNA
- Chain j
- 30S ribosomal protein S11
- Chain t
- 30S ribosomal protein S21 (Fragment)
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