Loop IL_8G31

3D structure

PDB id: 8G31 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

Loop

Sequence: CAAUG*CGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCG
Length: 47 nucleotides
Bulged bases: 8G31|1|v|U|1240, 8G31|1|v|C|1302
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

8G31|1|v|C|1237
8G31|1|v|A|1238
8G31|1|v|A|1239
8G31|1|v|U|1240
8G31|1|v|G|1241
*
8G31|1|v|C|1296
8G31|1|v|G|1297
8G31|1|v|U|1298
8G31|1|v|A|1299
8G31|1|v|G|1300
8G31|1|v|U|1301
8G31|1|v|C|1302
8G31|1|v|C|1303
8G31|1|v|G|1304
8G31|1|v|G|1305
8G31|1|v|A|1306
8G31|1|v|U|1307
8G31|1|v|U|1308
8G31|1|v|G|1309
8G31|1|v|G|1310
8G31|1|v|A|1311
8G31|1|v|G|1312
8G31|1|v|U|1313
8G31|1|v|C|1314
8G31|1|v|U|1315
8G31|1|v|G|1316
8G31|1|v|C|1317
8G31|1|v|A|1318
8G31|1|v|A|1319
8G31|1|v|C|1320
8G31|1|v|U|1321
8G31|1|v|C|1322
8G31|1|v|G|1323
8G31|1|v|A|1324
8G31|1|v|C|1325
8G31|1|v|U|1326
8G31|1|v|C|1327
8G31|1|v|C|1328
8G31|1|v|A|1329
8G31|1|v|U|1330
8G31|1|v|G|1331
8G31|1|v|A|1332
8G31|1|v|A|1333
8G31|1|v|G|1334
8G31|1|v|U|1335
8G31|1|v|C|1336
8G31|1|v|G|1337

Current chains

Chain v: 16S

Nearby chains

Chain f: 30S ribosomal protein S7
Chain l: 30S ribosomal protein S13
Chain m: 30S ribosomal protein S14
Chain r: 30S ribosomal protein S19

IL_8G31_170