IL_8G31_173
3D structure
- PDB id
- 8G31 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGACC*GCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G31_173 not in the Motif Atlas
- Geometric match to IL_5J7L_274
- Geometric discrepancy: 0.2744
- The information below is about IL_5J7L_274
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
8G31|1|v|C|1259
8G31|1|v|G|1260
8G31|1|v|A|1261
8G31|1|v|C|1262
8G31|1|v|C|1263
*
8G31|1|v|G|1272
8G31|1|v|C|1273
8G31|1|v|A|1274
8G31|1|v|A|1275
8G31|1|v|G|1276
Current chains
- Chain v
- 16S
Nearby chains
- Chain m
- 30S ribosomal protein S14
- Chain r
- 30S ribosomal protein S19
- Chain u
- Transcription termination/antitermination protein NusG
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