IL_8G31_185

3D structure

PDB id

8G31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAACUAGG*CUGUC

Length

14 nucleotides

Bulged bases

8G31|1|B|G|1992

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G31_185 not in the Motif Atlas

Homologous match to IL_4WF9_117

Geometric discrepancy: 0.0922

The information below is about IL_4WF9_117

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22854.4

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

7

Unit IDs

8G31|1|B|G|1666
8G31|1|B|G|1667
8G31|1|B|A|1668
8G31|1|B|A|1669
8G31|1|B|C|1670
8G31|1|B|U|1671
8G31|1|B|A|1672
8G31|1|B|G|1673
8G31|1|B|G|1674
*
8G31|1|B|C|1990
8G31|1|B|U|1991
8G31|1|B|G|1992
8G31|1|B|U|1993
8G31|1|B|C|1994

Current chains

Chain B

23S

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L14