IL_8G31_188

3D structure

PDB id

8G31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAUUGAGCCUUGAUG*CUUUAAUGUUUGAUG

Length

30 nucleotides

Bulged bases

8G31|1|B|U|2099, 8G31|1|B|G|2102, 8G31|1|B|C|2104, 8G31|1|B|U|2105, 8G31|1|B|G|2107, 8G31|1|B|U|2109, 8G31|1|B|U|2180, 8G31|1|B|A|2183, 8G31|1|B|U|2188, 8G31|1|B|U|2192

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G31|1|B|C|2096
8G31|1|B|A|2097
8G31|1|B|U|2098
8G31|1|B|U|2099
8G31|1|B|G|2100
8G31|1|B|A|2101
8G31|1|B|G|2102
8G31|1|B|C|2103
8G31|1|B|C|2104
8G31|1|B|U|2105
8G31|1|B|U|2106
8G31|1|B|G|2107
8G31|1|B|A|2108
8G31|1|B|U|2109
8G31|1|B|G|2110
*
8G31|1|B|C|2179
8G31|1|B|U|2180
8G31|1|B|U|2181
8G31|1|B|U|2182
8G31|1|B|A|2183
8G31|1|B|A|2184
8G31|1|B|U|2185
8G31|1|B|G|2186
8G31|1|B|U|2187
8G31|1|B|U|2188
8G31|1|B|U|2189
8G31|1|B|G|2190
8G31|1|B|A|2191
8G31|1|B|U|2192
8G31|1|B|G|2193

Current chains

Chain B

23S

Nearby chains