IL_8G34_176

3D structure

PDB id

8G34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

8G34|1|v|C|1400, 8G34|1|v|A|1503

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G34_176 not in the Motif Atlas

Geometric match to IL_5J7L_058

Geometric discrepancy: 0.13

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

8G34|1|v|C|1399
8G34|1|v|C|1400
8G34|1|v|G|1401
*
8G34|1|v|C|1501
8G34|1|v|A|1502
8G34|1|v|A|1503
8G34|1|v|G|1504

Current chains

Chain v

16S

Nearby chains

Chain h

30S ribosomal protein S9