IL_8G38_029

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGG*CAAUC

Length

8 nucleotides

Bulged bases

8G38|1|B|A|788, 8G38|1|B|A|789

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G38_029 not in the Motif Atlas

Geometric match to IL_8VTW_022

Geometric discrepancy: 0.1026

The information below is about IL_8VTW_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_90991.8

Basepair signature

cWW-cWW

Number of instances in this motif group

6

Unit IDs

8G38|1|B|G|775
8G38|1|B|G|776
8G38|1|B|G|777
*
8G38|1|B|C|787
8G38|1|B|A|788
8G38|1|B|A|789
8G38|1|B|U|790
8G38|1|B|C|791

Current chains

Chain B

23S

Nearby chains

Chain 2

50S ribosomal protein L34

Chain C

50S ribosomal protein L2

Chain S

50S ribosomal protein L22