IL_8G60_212

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CC*GUG

Length

5 nucleotides

Bulged bases

8G60|1|S2|U|328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G60_212 not in the Motif Atlas

Geometric match to IL_5FQ5_002

Geometric discrepancy: 0.2687

The information below is about IL_5FQ5_002

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

8G60|1|S2|C|322
8G60|1|S2|C|323
*
8G60|1|S2|G|327
8G60|1|S2|U|328
8G60|1|S2|G|329

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LW

eL24

Chain SG

eS6