IL_8G60_238
3D structure
- PDB id
- 8G60 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- GAC*GUUU
- Length
- 7 nucleotides
- Bulged bases
- 8G60|1|S2|U|1016
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G60_238 not in the Motif Atlas
- Geometric match to IL_3TD0_005
- Geometric discrepancy: 0.2444
- The information below is about IL_3TD0_005
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
8G60|1|S2|G|925
8G60|1|S2|A|926
8G60|1|S2|C|927
*
8G60|1|S2|G|1014
8G60|1|S2|U|1015
8G60|1|S2|U|1016
8G60|1|S2|U|1017
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SN
- uS15
- Chain Sb
- eS27
Coloring options: