IL_8G60_246
3D structure
- PDB id
- 8G60 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- CGAU*GCAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G60_246 not in the Motif Atlas
- Homologous match to IL_4V88_438
- Geometric discrepancy: 0.1078
- The information below is about IL_4V88_438
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
8G60|1|S2|C|1098
8G60|1|S2|G|1099
8G60|1|S2|A|1100
8G60|1|S2|U|1101
*
8G60|1|S2|G|1131
8G60|1|S2|C|1132
8G60|1|S2|A|1133
8G60|1|S2|G|1134
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SA
- uS2
- Chain SB
- eS1
- Chain SN
- uS15
- Chain SR
- eS17
- Chain Sa
- eS26
- Chain Sb
- eS27
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