IL_8G60_312
3D structure
- PDB id
- 8G60 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- U(PSU)GA*(PSU)ACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G60_312 not in the Motif Atlas
- Homologous match to IL_8C3A_109
- Geometric discrepancy: 0.3615
- The information below is about IL_8C3A_109
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
8G60|1|L5|U|4295
8G60|1|L5|PSU|4296
8G60|1|L5|G|4297
8G60|1|L5|A|4298
*
8G60|1|L5|PSU|4312
8G60|1|L5|A|4313
8G60|1|L5|C|4314
8G60|1|L5|A|4315
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LD
- uL18
- Chain LQ
- eL18
- Chain LT
- eL21
- Chain Lb
- eL29
- Chain Lo
- eL42
Coloring options: