IL_8G60_331

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

AC*GAA(PSU)

Length

6 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G60_331 not in the Motif Atlas

Homologous match to IL_8P9A_412

Geometric discrepancy: 0.3585

The information below is about IL_8P9A_412

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_73108.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

29

Unit IDs

8G60|1|S2|A|802
8G60|1|S2|C|803
*
8G60|1|S2|G|860
8G60|1|S2|A|861
8G60|1|S2|A|862
8G60|1|S2|PSU|863

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SH

eS7

Chain SL

uS17

Chain SW

uS8

Chain SX

uS12