IL_8G61_121

3D structure

PDB id

8G61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G61|1|L5|C|3708
8G61|1|L5|U|3709
8G61|1|L5|G|3710
8G61|1|L5|A|3711
8G61|1|L5|A|3712
8G61|1|L5|U|3713
8G61|1|L5|G|3714
*
8G61|1|L5|C|3739
8G61|1|L5|G|3740
8G61|1|L5|C|3741
8G61|1|L5|G|3742

Current chains

Chain L5

28S rRNA

Nearby chains

Chain 5A

eIF5A1

Chain LA

uL2

Chain Lz

60S ribosomal protein L10a

Chain S2

Small subunit ribosomal RNA; SSU rRNA