IL_8G61_192

3D structure

PDB id

8G61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

GGG*CCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GGG,CCC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G61_192 not in the Motif Atlas

Homologous match to IL_4WSM_380

Geometric discrepancy: 0.2759

The information below is about IL_4WSM_380

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G61|1|Pt|G|5
8G61|1|Pt|G|6
8G61|1|Pt|G|7
*
8G61|1|Pt|C|67
8G61|1|Pt|C|68
8G61|1|Pt|C|69

Current chains

Chain Pt

RNA (77-MER)

Nearby chains

Chain 5A

eIF5A1

Chain At

Transfer RNA; tRNA

Chain LI

60S ribosomal protein L10