IL_8G61_206

3D structure

PDB id

8G61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

GCCACUU*AUGCCGAC

Length

15 nucleotides

Bulged bases

8G61|1|S2|C|139, 8G61|1|S2|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G61|1|S2|G|130
8G61|1|S2|C|139
8G61|1|S2|C|140
8G61|1|S2|A|141
8G61|1|S2|C|142
8G61|1|S2|U|143
8G61|1|S2|U|144
*
8G61|1|S2|A|175
8G61|1|S2|U|176
8G61|1|S2|G|177
8G61|1|S2|C|178
8G61|1|S2|C|179
8G61|1|S2|G|180
8G61|1|S2|A|181
8G61|1|S2|C|182

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SG

40S ribosomal protein S6