IL_8G61_267

3D structure

PDB id

8G61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

CAUGCUAA*U(PSU)A(OMG)AGG

Length

15 nucleotides

Bulged bases

8G61|1|S2|U|1397

QA status

Modified nucleotides: PSU, OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G61|1|S2|C|1395
8G61|1|S2|A|1396
8G61|1|S2|U|1397
8G61|1|S2|G|1398
8G61|1|S2|C|1399
8G61|1|S2|U|1400
8G61|1|S2|A|1401
8G61|1|S2|A|1402
*
8G61|1|S2|U|1444
8G61|1|S2|PSU|1445
8G61|1|S2|A|1446
8G61|1|S2|OMG|1447
8G61|1|S2|A|1448
8G61|1|S2|G|1449
8G61|1|S2|G|1450

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SQ

40S ribosomal protein S16

Chain SR

40S ribosomal protein S17

Chain SU

40S ribosomal protein S20

Chain Sg

Receptor of activated protein C kinase 1