IL_8G7P_074

3D structure

PDB id

8G7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GC*GCAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G7P_074 not in the Motif Atlas

Homologous match to IL_4WF9_076

Geometric discrepancy: 0.118

The information below is about IL_4WF9_076

Detailed Annotation

Bulged stacked bases

Broad Annotation

No text annotation

Motif group

IL_24886.2

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

12

Unit IDs

8G7P|1|A|G|1933
8G7P|1|A|C|1934
*
8G7P|1|A|G|1964
8G7P|1|A|C|1965
8G7P|1|A|A|1966
8G7P|1|A|C|1967

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain x

Transfer RNA; tRNA