IL_8G7P_086

3D structure

PDB id

8G7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGG*CCAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GUGG,CCAC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G7P_086 not in the Motif Atlas

Geometric match to IL_4EYA_010

Geometric discrepancy: 0.3518

The information below is about IL_4EYA_010

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

39

Unit IDs

8G7P|1|A|G|2121
8G7P|1|A|U|2122
8G7P|1|A|G|2123
8G7P|1|A|G|2124
*
8G7P|1|A|C|2174
8G7P|1|A|C|2175
8G7P|1|A|A|2176
8G7P|1|A|C|2177

Current chains

Chain A

23S Ribosomal RNA

Nearby chains