IL_8G7Q_087

3D structure

PDB id

8G7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGGA*UCUGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G7Q_087 not in the Motif Atlas

Geometric match to IL_8D29_010

Geometric discrepancy: 0.3681

The information below is about IL_8D29_010

Detailed Annotation

Partly complementary

Broad Annotation

Partly complementary

Motif group

IL_49751.4

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

8G7Q|1|A|G|2138
8G7Q|1|A|U|2139
8G7Q|1|A|G|2140
8G7Q|1|A|G|2141
8G7Q|1|A|A|2142
*
8G7Q|1|A|U|2149
8G7Q|1|A|C|2150
8G7Q|1|A|U|2151
8G7Q|1|A|G|2152
8G7Q|1|A|C|2153

Current chains

Chain A

23S Ribosomal RNA

Nearby chains