IL_8G7Q_164

3D structure

PDB id

8G7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCU*G(2MG)C

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G7Q_164 not in the Motif Atlas

Geometric match to IL_4WF9_042

Geometric discrepancy: 0.1835

The information below is about IL_4WF9_042

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

8G7Q|1|a|G|1050
8G7Q|1|a|C|1051
8G7Q|1|a|U|1052
*
8G7Q|1|a|G|1206
8G7Q|1|a|2MG|1207
8G7Q|1|a|C|1208

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain n

30S ribosomal protein S14

Chain w

Transfer RNA; tRNA