3D structure

PDB id
8G7R (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
ACUAGG*CUGU
Length
10 nucleotides
Bulged bases
8G7R|1|A|G|1992
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8G7R_064 not in the Motif Atlas
Geometric match to IL_4WF9_065
Geometric discrepancy: 0.0959
The information below is about IL_4WF9_065
Detailed Annotation
Intercalated tWH
Broad Annotation
Intercalated tWH
Motif group
IL_76758.2
Basepair signature
cWW-L-R-L-cWW-L-L
Number of instances in this motif group
7

Unit IDs

8G7R|1|A|A|1669
8G7R|1|A|C|1670
8G7R|1|A|U|1671
8G7R|1|A|A|1672
8G7R|1|A|G|1673
8G7R|1|A|G|1674
*
8G7R|1|A|C|1990
8G7R|1|A|U|1991
8G7R|1|A|G|1992
8G7R|1|A|U|1993

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain D
50S ribosomal protein L3
Chain M
50S ribosomal protein L14

Coloring options:


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