IL_8G7S_031

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCA*UG

Length

5 nucleotides

Bulged bases

8G7S|1|A|C|995

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G7S_031 not in the Motif Atlas

Homologous match to IL_7RQB_035

Geometric discrepancy: 0.1089

The information below is about IL_7RQB_035

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_61258.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

40

Unit IDs

8G7S|1|A|C|994
8G7S|1|A|C|995
8G7S|1|A|A|996
*
8G7S|1|A|U|1159
8G7S|1|A|G|1160

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L30

Chain L

50S ribosomal protein L13

Chain S

50S ribosomal protein L20

Chain T

Ribosomal protein L21