IL_8G7S_053

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

8G7S|1|A|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G7S_053 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.0815

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

8G7S|1|A|C|1437
8G7S|1|A|U|1438
8G7S|1|A|A|1439
8G7S|1|A|U|1440
*
8G7S|1|A|A|1551
8G7S|1|A|A|1552
8G7S|1|A|A|1553
8G7S|1|A|U|1554
8G7S|1|A|G|1555

Current chains

Chain A

23S Ribosomal RNA

Nearby chains