IL_8G7S_056

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGUAG*UGAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G7S_056 not in the Motif Atlas

Homologous match to IL_5J7L_300

Geometric discrepancy: 0.1748

The information below is about IL_5J7L_300

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_38862.4

Basepair signature

cWW-cSH-R-tWH-tHS-cWW

Number of instances in this motif group

5

Unit IDs

8G7S|1|A|U|1474
8G7S|1|A|G|1475
8G7S|1|A|U|1476
8G7S|1|A|A|1477
8G7S|1|A|G|1478
*
8G7S|1|A|U|1513
8G7S|1|A|G|1514
8G7S|1|A|A|1515
8G7S|1|A|G|1516
8G7S|1|A|G|1517

Current chains

Chain A

23S Ribosomal RNA

Nearby chains