IL_8G7S_171

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUUGC*GAACUC

Length

11 nucleotides

Bulged bases

8G7S|1|a|U|1126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G7S_171 not in the Motif Atlas

Homologous match to IL_5J7L_051

Geometric discrepancy: 0.1613

The information below is about IL_5J7L_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_06691.1

Basepair signature

cWW-cWS-L-R-L-R-cWW-L

Number of instances in this motif group

2

Unit IDs

8G7S|1|a|G|1124
8G7S|1|a|U|1125
8G7S|1|a|U|1126
8G7S|1|a|G|1127
8G7S|1|a|C|1128
*
8G7S|1|a|G|1144
8G7S|1|a|A|1145
8G7S|1|a|A|1146
8G7S|1|a|C|1147
8G7S|1|a|U|1148
8G7S|1|a|C|1149

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10