IL_8G7S_177

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G7S_177 not in the Motif Atlas

Homologous match to IL_4LFB_055

Geometric discrepancy: 0.1356

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

8G7S|1|a|C|1303
8G7S|1|a|G|1304
8G7S|1|a|G|1305
8G7S|1|a|A|1306
8G7S|1|a|U|1307
8G7S|1|a|U|1308
*
8G7S|1|a|A|1329
8G7S|1|a|U|1330
8G7S|1|a|G|1331
8G7S|1|a|A|1332
8G7S|1|a|A|1333
8G7S|1|a|G|1334

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13