IL_8G7S_201

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGCAU*AUG(2MG)

Length

10 nucleotides

Bulged bases

8G7S|1|a|C|1054

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G7S_201 not in the Motif Atlas

Homologous match to IL_5J7L_362

Geometric discrepancy: 0.2439

The information below is about IL_5J7L_362

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49612.1

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

2

Unit IDs

8G7S|1|a|C|1051
8G7S|1|a|U|1052
8G7S|1|a|G|1053
8G7S|1|a|C|1054
8G7S|1|a|A|1055
8G7S|1|a|U|1056
*
8G7S|1|a|A|1204
8G7S|1|a|U|1205
8G7S|1|a|G|1206
8G7S|1|a|2MG|1207

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14